Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac4Q6NZM9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac4Q6NZM9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Hdac4Q6NZM9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac4Q6NZM9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac4Q6NZM9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac4Q6NZM9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac4Q6NZM9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac4Q6NZM9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac4Q6NZM9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms