Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptpdc1Q6NZK8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Gm25745-201ENSMUST00000174945 133 ntBASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptpdc1Q6NZK8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Gm18669-201ENSMUST00000216049 778 ntBASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptpdc1Q6NZK8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptpdc1Q6NZK8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptpdc1Q6NZK8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms