Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.63■□□□□ 0.25
Scube3Q66PY1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.63■□□□□ 0.25
Scube3Q66PY1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.63■□□□□ 0.25
Scube3Q66PY1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.63■□□□□ 0.25
Scube3Q66PY1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm6257-201ENSMUST00000163864 910 ntBASIC16.62■□□□□ 0.25
Scube3Q66PY1 Mir8098-201ENSMUST00000184011 137 ntBASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.62■□□□□ 0.25
Scube3Q66PY1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.62■□□□□ 0.25
Scube3Q66PY1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Gm5867-201ENSMUST00000063197 592 ntBASIC16.62■□□□□ 0.25
Scube3Q66PY1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scube3Q66PY1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Gm8097-201ENSMUST00000117903 829 ntBASIC16.61■□□□□ 0.25
Scube3Q66PY1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.61■□□□□ 0.25
Scube3Q66PY1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.61■□□□□ 0.25
Scube3Q66PY1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.61■□□□□ 0.25
Scube3Q66PY1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scube3Q66PY1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.6■□□□□ 0.25
Scube3Q66PY1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gm18622-201ENSMUST00000219361 595 ntBASIC16.6■□□□□ 0.25
Scube3Q66PY1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scube3Q66PY1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.6■□□□□ 0.25
Scube3Q66PY1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms