Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col7a1Q63870 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Col7a1Q63870 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Gm16026-204ENSMUST00000162652 683 ntBASIC13.01□□□□□ -0.33
Col7a1Q63870 Gm5035-201ENSMUST00000215581 927 ntBASIC13.01□□□□□ -0.33
Col7a1Q63870 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Col7a1Q63870 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.01□□□□□ -0.33
Col7a1Q63870 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.01□□□□□ -0.33
Col7a1Q63870 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.01□□□□□ -0.33
Col7a1Q63870 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col7a1Q63870 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col7a1Q63870 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col7a1Q63870 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col7a1Q63870 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13□□□□□ -0.33
Col7a1Q63870 Gm21854-201ENSMUST00000179901 471 ntBASIC13□□□□□ -0.33
Col7a1Q63870 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Col7a1Q63870 Gm19164-201ENSMUST00000210667 640 ntBASIC13□□□□□ -0.33
Col7a1Q63870 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col7a1Q63870 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col7a1Q63870 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col7a1Q63870 Gm45195-201ENSMUST00000205597 1008 ntBASIC13□□□□□ -0.33
Col7a1Q63870 AC238811.1-201ENSMUST00000225302 441 ntBASIC13□□□□□ -0.33
Col7a1Q63870 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col7a1Q63870 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.99□□□□□ -0.33
Col7a1Q63870 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.99□□□□□ -0.33
Col7a1Q63870 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.99□□□□□ -0.33
Col7a1Q63870 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.99□□□□□ -0.33
Col7a1Q63870 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col7a1Q63870 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col7a1Q63870 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.98□□□□□ -0.33
Col7a1Q63870 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Col7a1Q63870 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm44344-201ENSMUST00000200287 129 ntBASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.98□□□□□ -0.33
Col7a1Q63870 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Col7a1Q63870 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm12742-201ENSMUST00000117326 410 ntBASIC12.98□□□□□ -0.33
Col7a1Q63870 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col7a1Q63870 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.98□□□□□ -0.33
Col7a1Q63870 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col7a1Q63870 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.97□□□□□ -0.33
Col7a1Q63870 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.97□□□□□ -0.33
Col7a1Q63870 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.97□□□□□ -0.33
Col7a1Q63870 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms