Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim27Q62158 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim27Q62158 Gm21362-201ENSMUST00000194272 928 ntBASIC19.46■□□□□ 0.71
Trim27Q62158 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.46■□□□□ 0.71
Trim27Q62158 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trim27Q62158 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.46■□□□□ 0.71
Trim27Q62158 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim27Q62158 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim27Q62158 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Trim27Q62158 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim27Q62158 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Trim27Q62158 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm8825-201ENSMUST00000182565 998 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm4518-201ENSMUST00000182638 718 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim27Q62158 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.45■□□□□ 0.7
Trim27Q62158 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim27Q62158 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim27Q62158 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Trim27Q62158 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.44■□□□□ 0.7
Trim27Q62158 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim27Q62158 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim27Q62158 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim27Q62158 Gm28033-201ENSMUST00000184224 96 ntBASIC19.44■□□□□ 0.7
Trim27Q62158 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.44■□□□□ 0.7
Trim27Q62158 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.44■□□□□ 0.7
Trim27Q62158 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Trim27Q62158 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim27Q62158 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim27Q62158 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim27Q62158 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim27Q62158 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim27Q62158 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.43■□□□□ 0.7
Trim27Q62158 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim27Q62158 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim27Q62158 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Trim27Q62158 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim27Q62158 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim27Q62158 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim27Q62158 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim27Q62158 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.42■□□□□ 0.7
Trim27Q62158 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Gm4459-201ENSMUST00000118750 468 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms