Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ctr9Q62018 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ctr9Q62018 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.65■□□□□ 0.58
Ctr9Q62018 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.65■□□□□ 0.58
Ctr9Q62018 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.65■□□□□ 0.58
Ctr9Q62018 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctr9Q62018 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.65■□□□□ 0.58
Ctr9Q62018 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ctr9Q62018 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctr9Q62018 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Ctr9Q62018 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctr9Q62018 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ctr9Q62018 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Ctr9Q62018 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ctr9Q62018 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ctr9Q62018 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctr9Q62018 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ctr9Q62018 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ctr9Q62018 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctr9Q62018 AW822252-206ENSMUST00000208904 237 ntBASIC18.64■□□□□ 0.57
Ctr9Q62018 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.64■□□□□ 0.57
Ctr9Q62018 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctr9Q62018 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ctr9Q62018 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ctr9Q62018 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctr9Q62018 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctr9Q62018 Gm12350-201ENSMUST00000121208 462 ntBASIC18.63■□□□□ 0.57
Ctr9Q62018 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.63■□□□□ 0.57
Ctr9Q62018 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.63■□□□□ 0.57
Ctr9Q62018 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctr9Q62018 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Gm15173-201ENSMUST00000122049 433 ntBASIC18.62■□□□□ 0.57
Ctr9Q62018 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.62■□□□□ 0.57
Ctr9Q62018 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.62■□□□□ 0.57
Ctr9Q62018 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.62■□□□□ 0.57
Ctr9Q62018 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.62■□□□□ 0.57
Ctr9Q62018 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctr9Q62018 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ctr9Q62018 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctr9Q62018 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms