Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm18766-201ENSMUST00000189811 808 ntBASIC21.27■■□□□ 1
Gli3Q61602 Gm38225-201ENSMUST00000194001 393 ntBASIC21.27■■□□□ 1
Gli3Q61602 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC21.27■■□□□ 1
Gli3Q61602 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gli3Q61602 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gli3Q61602 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gli3Q61602 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Gli3Q61602 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.27■■□□□ 1
Gli3Q61602 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gli3Q61602 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gli3Q61602 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.27■□□□□ 0.99
Gli3Q61602 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Gli3Q61602 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Gli3Q61602 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC21.27■□□□□ 0.99
Gli3Q61602 Gm18049-201ENSMUST00000208909 581 ntBASIC21.27■□□□□ 0.99
Gli3Q61602 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gli3Q61602 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gli3Q61602 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gli3Q61602 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC21.26■□□□□ 0.99
Gli3Q61602 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC21.26■□□□□ 0.99
Gli3Q61602 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC21.26■□□□□ 0.99
Gli3Q61602 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
Gli3Q61602 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gli3Q61602 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Gli3Q61602 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gli3Q61602 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gli3Q61602 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gli3Q61602 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gli3Q61602 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gli3Q61602 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gli3Q61602 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gli3Q61602 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC21.25■□□□□ 0.99
Gli3Q61602 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC21.25■□□□□ 0.99
Gli3Q61602 AC130669.1-201ENSMUST00000228537 1672 ntBASIC21.25■□□□□ 0.99
Gli3Q61602 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.24■□□□□ 0.99
Gli3Q61602 Gm11543-201ENSMUST00000120758 370 ntBASIC21.24■□□□□ 0.99
Gli3Q61602 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC21.24■□□□□ 0.99
Gli3Q61602 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
Gli3Q61602 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Gli3Q61602 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gli3Q61602 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Gli3Q61602 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gli3Q61602 Gm9115-201ENSMUST00000120192 1348 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gli3Q61602 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Gm6539-201ENSMUST00000119157 1064 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC21.23■□□□□ 0.99
Gli3Q61602 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gli3Q61602 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Gli3Q61602 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC21.23■□□□□ 0.99
Gli3Q61602 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gli3Q61602 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gli3Q61602 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.23■□□□□ 0.99
Gli3Q61602 Gm18827-201ENSMUST00000188341 790 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Gm42612-201ENSMUST00000197986 623 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Gm43170-201ENSMUST00000199827 612 ntBASIC21.23■□□□□ 0.99
Gli3Q61602 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gli3Q61602 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gli3Q61602 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gli3Q61602 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Gli3Q61602 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC21.22■□□□□ 0.99
Gli3Q61602 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC21.22■□□□□ 0.99
Gli3Q61602 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gli3Q61602 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gli3Q61602 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gli3Q61602 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms