Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ift88Q61371 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.58■□□□□ 0.4
Ift88Q61371 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.57■□□□□ 0.4
Ift88Q61371 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.57■□□□□ 0.4
Ift88Q61371 Gm10052-201ENSMUST00000168019 960 ntBASIC17.57■□□□□ 0.4
Ift88Q61371 Gm43799-201ENSMUST00000201845 579 ntBASIC17.57■□□□□ 0.4
Ift88Q61371 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.57■□□□□ 0.4
Ift88Q61371 Gm21559-201ENSMUST00000220638 855 ntBASIC17.57■□□□□ 0.4
Ift88Q61371 Gm7729-201ENSMUST00000050143 801 ntBASIC17.57■□□□□ 0.4
Ift88Q61371 Gm8587-201ENSMUST00000076538 843 ntBASIC17.57■□□□□ 0.4
Ift88Q61371 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.57■□□□□ 0.4
Ift88Q61371 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ift88Q61371 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.57■□□□□ 0.4
Ift88Q61371 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ift88Q61371 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.56■□□□□ 0.4
Ift88Q61371 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Gm44430-201ENSMUST00000203376 995 ntBASIC17.56■□□□□ 0.4
Ift88Q61371 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.56■□□□□ 0.4
Ift88Q61371 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.56■□□□□ 0.4
Ift88Q61371 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Ift88Q61371 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ift88Q61371 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ift88Q61371 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ift88Q61371 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Ift88Q61371 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ift88Q61371 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Ift88Q61371 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ift88Q61371 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.55■□□□□ 0.4
Ift88Q61371 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.55■□□□□ 0.4
Ift88Q61371 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ift88Q61371 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ift88Q61371 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.54■□□□□ 0.4
Ift88Q61371 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ift88Q61371 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.54■□□□□ 0.4
Ift88Q61371 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.54■□□□□ 0.4
Ift88Q61371 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.54■□□□□ 0.4
Ift88Q61371 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Ift88Q61371 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ift88Q61371 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ift88Q61371 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ift88Q61371 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.53■□□□□ 0.4
Ift88Q61371 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ift88Q61371 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.53■□□□□ 0.4
Ift88Q61371 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ift88Q61371 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms