Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Ptch1Q61115 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Gm44855-201ENSMUST00000205725 362 ntBASIC22.69■■□□□ 1.22
Ptch1Q61115 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch1Q61115 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC22.68■■□□□ 1.22
Ptch1Q61115 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC22.68■■□□□ 1.22
Ptch1Q61115 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Gm13015-201ENSMUST00000118674 204 ntBASIC22.68■■□□□ 1.22
Ptch1Q61115 Gm12490-201ENSMUST00000120255 560 ntBASIC22.68■■□□□ 1.22
Ptch1Q61115 Gm16215-201ENSMUST00000161990 637 ntBASIC22.68■■□□□ 1.22
Ptch1Q61115 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Ptch1Q61115 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC22.68■■□□□ 1.22
Ptch1Q61115 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ptch1Q61115 AC132863.2-201ENSMUST00000226643 799 ntBASIC22.68■■□□□ 1.22
Ptch1Q61115 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch1Q61115 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Ptch1Q61115 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Gm9824-201ENSMUST00000178707 561 ntBASIC22.67■■□□□ 1.22
Ptch1Q61115 Gm28630-201ENSMUST00000187806 498 ntBASIC22.67■■□□□ 1.22
Ptch1Q61115 Gm9794-201ENSMUST00000202370 423 ntBASIC22.67■■□□□ 1.22
Ptch1Q61115 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Ptch1Q61115 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptch1Q61115 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 AC135669.1-201ENSMUST00000213585 412 ntBASIC22.66■■□□□ 1.22
Ptch1Q61115 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC22.66■■□□□ 1.22
Ptch1Q61115 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ptch1Q61115 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch1Q61115 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC22.66■■□□□ 1.22
Ptch1Q61115 Gm10499-201ENSMUST00000174094 934 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Gm9063-201ENSMUST00000223299 582 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 AC132467.2-202ENSMUST00000227726 559 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ptch1Q61115 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Haglr-201ENSMUST00000100000 2085 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Syt7-205ENSMUST00000224135 1557 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Cdk7-205ENSMUST00000225990 1159 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Gm13517-201ENSMUST00000120782 1495 ntBASIC22.65■■□□□ 1.22
Ptch1Q61115 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch1Q61115 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptch1Q61115 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptch1Q61115 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC22.64■■□□□ 1.22
Ptch1Q61115 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptch1Q61115 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch1Q61115 Gm15222-202ENSMUST00000228667 1726 ntBASIC22.64■■□□□ 1.21
Ptch1Q61115 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Ptch1Q61115 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC22.64■■□□□ 1.21
Ptch1Q61115 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC22.64■■□□□ 1.21
Ptch1Q61115 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms