Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.12■□□□□ 0.01
Nr1h4Q60641 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1h4Q60641 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.11■□□□□ 0.01
Nr1h4Q60641 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nr1h4Q60641 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Gm10812-201ENSMUST00000099864 546 ntBASIC15.1■□□□□ 0.01
Nr1h4Q60641 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nr1h4Q60641 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.09■□□□□ 0.01
Nr1h4Q60641 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.09■□□□□ 0.01
Nr1h4Q60641 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nr1h4Q60641 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms