Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prdm1Q60636 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.52■□□□□ 0.56
Prdm1Q60636 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Prdm1Q60636 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.52■□□□□ 0.56
Prdm1Q60636 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Prdm1Q60636 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prdm1Q60636 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prdm1Q60636 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prdm1Q60636 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.52■□□□□ 0.55
Prdm1Q60636 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Prdm1Q60636 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prdm1Q60636 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Prdm1Q60636 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prdm1Q60636 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Prdm1Q60636 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Gm9172-201ENSMUST00000212092 954 ntBASIC18.51■□□□□ 0.55
Prdm1Q60636 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.51■□□□□ 0.55
Prdm1Q60636 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.51■□□□□ 0.55
Prdm1Q60636 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm1Q60636 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Prdm1Q60636 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prdm1Q60636 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Prdm1Q60636 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm1Q60636 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Prdm1Q60636 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.49■□□□□ 0.55
Prdm1Q60636 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm11452-201ENSMUST00000122376 690 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm8825-201ENSMUST00000182565 998 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm4518-201ENSMUST00000182638 718 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Grk6-207ENSMUST00000225925 2769 ntBASIC18.49■□□□□ 0.55
Prdm1Q60636 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm1Q60636 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm1Q60636 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm1Q60636 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.48■□□□□ 0.55
Prdm1Q60636 Gm8097-201ENSMUST00000117903 829 ntBASIC18.48■□□□□ 0.55
Prdm1Q60636 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.48■□□□□ 0.55
Prdm1Q60636 Gm6257-201ENSMUST00000163864 910 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms