Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm5643-201ENSMUST00000117081 966 ntBASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Timm23-208ENSMUST00000226683 750 ntBASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm10698-201ENSMUST00000182663 604 ntBASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm37856-201ENSMUST00000191634 999 ntBASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms