Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim41Q5NCC3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Gm5866-201ENSMUST00000177881 973 ntBASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Gm7229-201ENSMUST00000214719 1007 ntBASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Cdk7-205ENSMUST00000225990 1159 ntBASIC27.39■■□□□ 1.98
Trim41Q5NCC3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim41Q5NCC3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Gm4899-201ENSMUST00000178708 719 ntBASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Gm44945-201ENSMUST00000206764 1187 ntBASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trim41Q5NCC3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC27.37■■□□□ 1.97
Trim41Q5NCC3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Gm27437-201ENSMUST00000183429 107 ntBASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Gm19164-201ENSMUST00000210667 640 ntBASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Trim41Q5NCC3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Mir6420-201ENSMUST00000185032 102 ntBASIC27.35■■□□□ 1.97
Trim41Q5NCC3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 AC147366.1-201ENSMUST00000227671 852 ntBASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trim41Q5NCC3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gm11185-201ENSMUST00000117732 1007 ntBASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gm27300-201ENSMUST00000184085 97 ntBASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gm27335-201ENSMUST00000184758 97 ntBASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim41Q5NCC3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trim41Q5NCC3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trim41Q5NCC3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trim41Q5NCC3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms