Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Gm10499-201ENSMUST00000174094 934 ntBASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shank3Q4ACU6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Shank3Q4ACU6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Shank3Q4ACU6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shank3Q4ACU6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shank3Q4ACU6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank3Q4ACU6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Gm13823-201ENSMUST00000119930 345 ntBASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Gm24158-201ENSMUST00000175263 71 ntBASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank3Q4ACU6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank3Q4ACU6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Gm14722-201ENSMUST00000118943 689 ntBASIC19.55■□□□□ 0.72
Shank3Q4ACU6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank3Q4ACU6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Gm2810-201ENSMUST00000118681 990 ntBASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank3Q4ACU6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms