Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Palb2Q3U0P1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Palb2Q3U0P1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Palb2Q3U0P1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Palb2Q3U0P1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Palb2Q3U0P1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Palb2Q3U0P1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Palb2Q3U0P1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Palb2Q3U0P1 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.64■□□□□ 0.42
Palb2Q3U0P1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Palb2Q3U0P1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Palb2Q3U0P1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Palb2Q3U0P1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Gm5186-201ENSMUST00000218781 920 ntBASIC17.64■□□□□ 0.41
Palb2Q3U0P1 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Palb2Q3U0P1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Palb2Q3U0P1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Palb2Q3U0P1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms