Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Mir770-201ENSMUST00000103252 94 ntBASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cul4aQ3TCH7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cul4aQ3TCH7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cul4aQ3TCH7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms