Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.22□□□□□ -0.29
Tff1Q08423 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.22□□□□□ -0.29
Tff1Q08423 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Gm7153-201ENSMUST00000117092 455 ntBASIC13.21□□□□□ -0.29
Tff1Q08423 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.21□□□□□ -0.29
Tff1Q08423 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tff1Q08423 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.21□□□□□ -0.29
Tff1Q08423 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tff1Q08423 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.21□□□□□ -0.3
Tff1Q08423 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tff1Q08423 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tff1Q08423 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tff1Q08423 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tff1Q08423 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tff1Q08423 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.2□□□□□ -0.3
Tff1Q08423 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tff1Q08423 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Tff1Q08423 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.2□□□□□ -0.3
Tff1Q08423 Gm28033-201ENSMUST00000184224 96 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 Gm44450-201ENSMUST00000199528 114 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 Gm18421-201ENSMUST00000204122 625 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 Gm5587-201ENSMUST00000206270 674 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Gm21559-201ENSMUST00000220638 855 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tff1Q08423 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Gm8587-201ENSMUST00000076538 843 ntBASIC13.2□□□□□ -0.3
Tff1Q08423 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.2□□□□□ -0.3
Tff1Q08423 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Tff1Q08423 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.2□□□□□ -0.3
Tff1Q08423 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tff1Q08423 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.19□□□□□ -0.3
Tff1Q08423 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tff1Q08423 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.19□□□□□ -0.3
Tff1Q08423 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tff1Q08423 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.19□□□□□ -0.3
Tff1Q08423 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.19□□□□□ -0.3
Tff1Q08423 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms