Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Thumpd3P97770 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Gm13186-201ENSMUST00000118031 316 ntBASIC16.17■□□□□ 0.18
Thumpd3P97770 Gm9013-201ENSMUST00000132939 882 ntBASIC16.17■□□□□ 0.18
Thumpd3P97770 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Thumpd3P97770 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Thumpd3P97770 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Thumpd3P97770 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.17■□□□□ 0.18
Thumpd3P97770 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd3P97770 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Thumpd3P97770 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Thumpd3P97770 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.16■□□□□ 0.18
Thumpd3P97770 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.16■□□□□ 0.18
Thumpd3P97770 App-207ENSMUST00000227737 2827 ntBASIC16.16■□□□□ 0.18
Thumpd3P97770 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd3P97770 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Thumpd3P97770 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd3P97770 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.15■□□□□ 0.18
Thumpd3P97770 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd3P97770 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.15■□□□□ 0.18
Thumpd3P97770 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd3P97770 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.15■□□□□ 0.18
Thumpd3P97770 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd3P97770 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd3P97770 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms