Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.96□□□□□ -0.01
Nkx3-2P97503 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx3-2P97503 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.95□□□□□ -0.02
Nkx3-2P97503 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Gm6376-201ENSMUST00000209407 580 ntBASIC14.95□□□□□ -0.02
Nkx3-2P97503 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.95□□□□□ -0.02
Nkx3-2P97503 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx3-2P97503 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm11452-201ENSMUST00000122376 690 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm12497-201ENSMUST00000138778 237 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm25745-201ENSMUST00000174945 133 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Mir6404-201ENSMUST00000183699 94 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44357-201ENSMUST00000195897 142 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm19658-201ENSMUST00000196231 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44367-201ENSMUST00000196836 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44350-201ENSMUST00000197197 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44390-201ENSMUST00000197533 144 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44313-201ENSMUST00000198018 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44486-201ENSMUST00000198508 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm43514-201ENSMUST00000198852 424 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44314-201ENSMUST00000199263 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44394-201ENSMUST00000199558 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44484-201ENSMUST00000199873 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44466-201ENSMUST00000200264 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm44359-201ENSMUST00000200671 138 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm6443-201ENSMUST00000203599 874 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Gm9172-201ENSMUST00000212092 954 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.94□□□□□ -0.02
Nkx3-2P97503 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx3-2P97503 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx3-2P97503 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms