Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ybx1P62960 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.22■□□□□ 0.19
Ybx1P62960 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.22■□□□□ 0.19
Ybx1P62960 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ybx1P62960 Gm4899-201ENSMUST00000178708 719 ntBASIC16.22■□□□□ 0.19
Ybx1P62960 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Ybx1P62960 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ybx1P62960 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ybx1P62960 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm26308-201ENSMUST00000157768 69 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm27300-201ENSMUST00000184085 97 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 Gm27335-201ENSMUST00000184758 97 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 Mir8117-201ENSMUST00000184773 107 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.21■□□□□ 0.19
Ybx1P62960 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.21■□□□□ 0.19
Ybx1P62960 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.21■□□□□ 0.19
Ybx1P62960 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ybx1P62960 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Ybx1P62960 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ybx1P62960 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ybx1P62960 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ybx1P62960 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ybx1P62960 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ybx1P62960 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.2■□□□□ 0.18
Ybx1P62960 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.2■□□□□ 0.18
Ybx1P62960 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ybx1P62960 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ybx1P62960 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ybx1P62960 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Ybx1P62960 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ybx1P62960 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ybx1P62960 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ybx1P62960 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms