Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.45□□□□□ -0.1
Vbp1P61759 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.45□□□□□ -0.1
Vbp1P61759 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.45□□□□□ -0.1
Vbp1P61759 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.45□□□□□ -0.1
Vbp1P61759 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vbp1P61759 Gm26524-201ENSMUST00000192339 390 ntBASIC14.45□□□□□ -0.1
Vbp1P61759 Gm10517-202ENSMUST00000192970 758 ntBASIC14.45□□□□□ -0.1
Vbp1P61759 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vbp1P61759 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.45□□□□□ -0.1
Vbp1P61759 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vbp1P61759 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Vbp1P61759 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vbp1P61759 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.44□□□□□ -0.1
Vbp1P61759 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Vbp1P61759 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.44□□□□□ -0.1
Vbp1P61759 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vbp1P61759 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vbp1P61759 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vbp1P61759 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vbp1P61759 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.43□□□□□ -0.1
Vbp1P61759 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.43□□□□□ -0.1
Vbp1P61759 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.43□□□□□ -0.1
Vbp1P61759 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vbp1P61759 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vbp1P61759 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.42□□□□□ -0.1
Vbp1P61759 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Rab3c-203ENSMUST00000224180 967 ntBASIC14.42□□□□□ -0.1
Vbp1P61759 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vbp1P61759 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms