Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.69■□□□□ 0.42
Nek1P51954 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nek1P51954 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nek1P51954 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nek1P51954 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nek1P51954 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.68■□□□□ 0.42
Nek1P51954 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nek1P51954 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Nek1P51954 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek1P51954 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nek1P51954 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.68■□□□□ 0.42
Nek1P51954 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.67■□□□□ 0.42
Nek1P51954 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Mir770-201ENSMUST00000103252 94 ntBASIC17.67■□□□□ 0.42
Nek1P51954 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nek1P51954 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek1P51954 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Nek1P51954 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nek1P51954 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek1P51954 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nek1P51954 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nek1P51954 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Gm24589-201ENSMUST00000116692 94 ntBASIC17.66■□□□□ 0.42
Nek1P51954 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nek1P51954 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.66■□□□□ 0.42
Nek1P51954 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek1P51954 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nek1P51954 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Nek1P51954 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nek1P51954 Gm27742-201ENSMUST00000184667 60 ntBASIC17.65■□□□□ 0.42
Nek1P51954 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.65■□□□□ 0.42
Nek1P51954 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek1P51954 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nek1P51954 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms