Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.8■□□□□ 0.6
Ercc3P49135 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.8■□□□□ 0.6
Ercc3P49135 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.8■□□□□ 0.6
Ercc3P49135 Gm11452-201ENSMUST00000122376 690 ntBASIC18.8■□□□□ 0.6
Ercc3P49135 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.8■□□□□ 0.6
Ercc3P49135 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ercc3P49135 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ercc3P49135 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.8■□□□□ 0.6
Ercc3P49135 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ercc3P49135 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ercc3P49135 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ercc3P49135 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ercc3P49135 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44357-201ENSMUST00000195897 142 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm19658-201ENSMUST00000196231 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44367-201ENSMUST00000196836 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44350-201ENSMUST00000197197 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44390-201ENSMUST00000197533 144 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44313-201ENSMUST00000198018 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44486-201ENSMUST00000198508 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44314-201ENSMUST00000199263 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44394-201ENSMUST00000199558 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44484-201ENSMUST00000199873 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44466-201ENSMUST00000200264 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44359-201ENSMUST00000200671 138 ntBASIC18.79■□□□□ 0.6
Ercc3P49135 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.79■□□□□ 0.6
Ercc3P49135 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ercc3P49135 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ercc3P49135 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ercc3P49135 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ercc3P49135 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Gm25406-201ENSMUST00000157599 105 ntBASIC18.78■□□□□ 0.6
Ercc3P49135 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ercc3P49135 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ercc3P49135 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ercc3P49135 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ercc3P49135 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms