Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.11□□□□□ -0.31
Hist1h1aP43275 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hist1h1aP43275 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Gm44450-201ENSMUST00000199528 114 ntBASIC13.1□□□□□ -0.31
Hist1h1aP43275 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.1□□□□□ -0.31
Hist1h1aP43275 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hist1h1aP43275 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.09□□□□□ -0.31
Hist1h1aP43275 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Gm18421-201ENSMUST00000204122 625 ntBASIC13.09□□□□□ -0.31
Hist1h1aP43275 Gm7213-201ENSMUST00000215977 950 ntBASIC13.09□□□□□ -0.31
Hist1h1aP43275 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1aP43275 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms