Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.94□□□□□ -0.02
Sox6P40645 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Gm13186-201ENSMUST00000118031 316 ntBASIC14.93□□□□□ -0.02
Sox6P40645 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.93□□□□□ -0.02
Sox6P40645 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.93□□□□□ -0.02
Sox6P40645 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.93□□□□□ -0.02
Sox6P40645 Gm10566-201ENSMUST00000086739 996 ntBASIC14.93□□□□□ -0.02
Sox6P40645 Asic1-205ENSMUST00000228185 1818 ntBASIC14.93□□□□□ -0.02
Sox6P40645 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox6P40645 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox6P40645 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Sybu-209ENSMUST00000228639 4113 ntBASIC14.92□□□□□ -0.02
Sox6P40645 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox6P40645 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Sox6P40645 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox6P40645 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox6P40645 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.92□□□□□ -0.02
Sox6P40645 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox6P40645 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sox6P40645 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox6P40645 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Gm18115-201ENSMUST00000221209 621 ntBASIC14.91□□□□□ -0.02
Sox6P40645 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Sox6P40645 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Sox6P40645 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox6P40645 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sox6P40645 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sox6P40645 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Sox6P40645 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.9□□□□□ -0.02
Sox6P40645 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.9□□□□□ -0.02
Sox6P40645 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms