Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Timp3P39876 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Timp3P39876 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.99□□□□□ -0.33
Timp3P39876 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.99□□□□□ -0.33
Timp3P39876 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.99□□□□□ -0.33
Timp3P39876 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Timp3P39876 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Timp3P39876 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Timp3P39876 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Timp3P39876 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Timp3P39876 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.98□□□□□ -0.33
Timp3P39876 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.98□□□□□ -0.33
Timp3P39876 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.98□□□□□ -0.33
Timp3P39876 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Timp3P39876 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Timp3P39876 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.98□□□□□ -0.33
Timp3P39876 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.98□□□□□ -0.33
Timp3P39876 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Timp3P39876 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Timp3P39876 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.98□□□□□ -0.33
Timp3P39876 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Timp3P39876 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Timp3P39876 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Timp3P39876 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.97□□□□□ -0.33
Timp3P39876 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.97□□□□□ -0.33
Timp3P39876 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.97□□□□□ -0.33
Timp3P39876 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.97□□□□□ -0.33
Timp3P39876 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.97□□□□□ -0.33
Timp3P39876 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Timp3P39876 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms