Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.8■□□□□ 0.12
LdlrP35951 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LdlrP35951 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Gm17808-201ENSMUST00000200859 894 ntBASIC15.8■□□□□ 0.12
LdlrP35951 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.8■□□□□ 0.12
LdlrP35951 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LdlrP35951 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.8■□□□□ 0.12
LdlrP35951 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LdlrP35951 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
LdlrP35951 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.79■□□□□ 0.12
LdlrP35951 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LdlrP35951 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LdlrP35951 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LdlrP35951 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.78■□□□□ 0.12
LdlrP35951 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LdlrP35951 Gm29707-201ENSMUST00000196325 491 ntBASIC15.78■□□□□ 0.12
LdlrP35951 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.78■□□□□ 0.12
LdlrP35951 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LdlrP35951 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
LdlrP35951 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.78■□□□□ 0.12
LdlrP35951 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.78■□□□□ 0.12
LdlrP35951 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LdlrP35951 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.77■□□□□ 0.12
LdlrP35951 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.77■□□□□ 0.12
LdlrP35951 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LdlrP35951 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
LdlrP35951 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.77■□□□□ 0.12
LdlrP35951 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.77■□□□□ 0.12
LdlrP35951 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LdlrP35951 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LdlrP35951 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms