Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Mmp13P33435 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Mmp13P33435 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Mmp13P33435 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
Mmp13P33435 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Mmp13P33435 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Gm29518-201ENSMUST00000190858 372 ntBASIC16.27■□□□□ 0.2
Mmp13P33435 Gm17808-201ENSMUST00000200859 894 ntBASIC16.27■□□□□ 0.2
Mmp13P33435 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.27■□□□□ 0.2
Mmp13P33435 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp13P33435 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp13P33435 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp13P33435 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp13P33435 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp13P33435 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp13P33435 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.27■□□□□ 0.19
Mmp13P33435 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.26■□□□□ 0.19
Mmp13P33435 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Mir770-201ENSMUST00000103252 94 ntBASIC16.26■□□□□ 0.19
Mmp13P33435 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Mmp13P33435 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.26■□□□□ 0.19
Mmp13P33435 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.26■□□□□ 0.19
Mmp13P33435 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Mmp13P33435 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp13P33435 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.25■□□□□ 0.19
Mmp13P33435 Gm7284-201ENSMUST00000131667 944 ntBASIC16.25■□□□□ 0.19
Mmp13P33435 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.25■□□□□ 0.19
Mmp13P33435 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp13P33435 Gm29707-201ENSMUST00000196325 491 ntBASIC16.25■□□□□ 0.19
Mmp13P33435 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Mmp13P33435 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.25■□□□□ 0.19
Mmp13P33435 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp13P33435 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Mmp13P33435 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp13P33435 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.25■□□□□ 0.19
Mmp13P33435 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Gm11950-201ENSMUST00000121615 838 ntBASIC16.24■□□□□ 0.19
Mmp13P33435 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp13P33435 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp13P33435 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp13P33435 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp13P33435 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp13P33435 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp13P33435 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp13P33435 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Mmp13P33435 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms