Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.02□□□□□ -0.17
Cd28P31041 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.02□□□□□ -0.17
Cd28P31041 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cd28P31041 Gm18115-201ENSMUST00000221209 621 ntBASIC14.02□□□□□ -0.17
Cd28P31041 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.02□□□□□ -0.17
Cd28P31041 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd28P31041 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd28P31041 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Cd28P31041 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cd28P31041 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.01□□□□□ -0.17
Cd28P31041 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.01□□□□□ -0.17
Cd28P31041 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.01□□□□□ -0.17
Cd28P31041 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.01□□□□□ -0.17
Cd28P31041 Timm23-208ENSMUST00000226683 750 ntBASIC14.01□□□□□ -0.17
Cd28P31041 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cd28P31041 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cd28P31041 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cd28P31041 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cd28P31041 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd28P31041 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cd28P31041 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14□□□□□ -0.17
Cd28P31041 Gm36967-201ENSMUST00000193814 266 ntBASIC14□□□□□ -0.17
Cd28P31041 AC164629.5-201ENSMUST00000220387 632 ntBASIC14□□□□□ -0.17
Cd28P31041 AC135637.1-201ENSMUST00000227750 365 ntBASIC14□□□□□ -0.17
Cd28P31041 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cd28P31041 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14□□□□□ -0.17
Cd28P31041 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cd28P31041 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cd28P31041 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.99□□□□□ -0.17
Cd28P31041 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Mir1199-201ENSMUST00000117015 119 ntBASIC13.99□□□□□ -0.17
Cd28P31041 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Cd28P31041 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cd28P31041 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.99□□□□□ -0.17
Cd28P31041 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cd28P31041 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms