Protein–RNA interactions for Protein: P28271

Aco1, Cytoplasmic aconitate hydratase, mousemouse

Known RBP Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aco1P28271 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.98■□□□□ 0.47
Aco1P28271 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.98■□□□□ 0.47
Aco1P28271 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.98■□□□□ 0.47
Aco1P28271 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.98■□□□□ 0.47
Aco1P28271 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Aco1P28271 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.98■□□□□ 0.47
Aco1P28271 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.98■□□□□ 0.47
Aco1P28271 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aco1P28271 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.98■□□□□ 0.47
Aco1P28271 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 Gm6257-201ENSMUST00000163864 910 ntBASIC17.97■□□□□ 0.47
Aco1P28271 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.97■□□□□ 0.47
Aco1P28271 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Gm6089-201ENSMUST00000197666 938 ntBASIC17.97■□□□□ 0.47
Aco1P28271 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.97■□□□□ 0.47
Aco1P28271 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aco1P28271 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.96■□□□□ 0.47
Aco1P28271 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.96■□□□□ 0.47
Aco1P28271 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Aco1P28271 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Aco1P28271 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Aco1P28271 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Aco1P28271 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.96■□□□□ 0.47
Aco1P28271 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.96■□□□□ 0.47
Aco1P28271 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.96■□□□□ 0.47
Aco1P28271 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.96■□□□□ 0.47
Aco1P28271 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.96■□□□□ 0.47
Aco1P28271 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.96■□□□□ 0.47
Aco1P28271 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.96■□□□□ 0.47
Aco1P28271 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aco1P28271 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Aco1P28271 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Aco1P28271 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.95■□□□□ 0.46
Aco1P28271 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.95■□□□□ 0.46
Aco1P28271 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.95■□□□□ 0.46
Aco1P28271 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.95■□□□□ 0.46
Aco1P28271 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.95■□□□□ 0.46
Aco1P28271 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.95■□□□□ 0.46
Aco1P28271 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aco1P28271 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms