Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
P20040 Gm11336-201ENSMUST00000118168 334 ntBASIC14.12□□□□□ -0.15
P20040 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.12□□□□□ -0.15
P20040 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.12□□□□□ -0.15
P20040 Gm18115-201ENSMUST00000221209 621 ntBASIC14.12□□□□□ -0.15
P20040 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
P20040 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
P20040 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P20040 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
P20040 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.11□□□□□ -0.15
P20040 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Phf7-203ENSMUST00000226565 1971 ntBASIC14.11□□□□□ -0.15
P20040 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.11□□□□□ -0.15
P20040 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.11□□□□□ -0.15
P20040 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
P20040 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
P20040 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
P20040 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
P20040 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.11□□□□□ -0.15
P20040 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
P20040 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P20040 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
P20040 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
P20040 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
P20040 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
P20040 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P20040 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.1□□□□□ -0.15
P20040 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Gm29518-201ENSMUST00000190858 372 ntBASIC14.1□□□□□ -0.15
P20040 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P20040 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.1□□□□□ -0.15
P20040 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
P20040 Gm7367-201ENSMUST00000057611 492 ntBASIC14.1□□□□□ -0.15
P20040 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.1□□□□□ -0.15
P20040 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
P20040 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
P20040 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
P20040 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.1□□□□□ -0.15
P20040 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P20040 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms