Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msx1P13297 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.03■□□□□ -0
Msx1P13297 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msx1P13297 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Msx1P13297 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Msx1P13297 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.02■□□□□ -0
Msx1P13297 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Msx1P13297 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.02■□□□□ -0
Msx1P13297 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.02■□□□□ -0
Msx1P13297 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.02■□□□□ -0
Msx1P13297 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.02■□□□□ -0
Msx1P13297 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.02■□□□□ -0
Msx1P13297 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Msx1P13297 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msx1P13297 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Msx1P13297 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msx1P13297 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msx1P13297 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Msx1P13297 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msx1P13297 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msx1P13297 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Msx1P13297 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.01□□□□□ -0.01
Msx1P13297 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Msx1P13297 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.01□□□□□ -0.01
Msx1P13297 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msx1P13297 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.01□□□□□ -0.01
Msx1P13297 Gm7063-201ENSMUST00000186840 981 ntBASIC15.01□□□□□ -0.01
Msx1P13297 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Msx1P13297 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Msx1P13297 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
Msx1P13297 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.01□□□□□ -0.01
Msx1P13297 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msx1P13297 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Gm43072-201ENSMUST00000200283 1671 ntBASIC15□□□□□ -0.01
Msx1P13297 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15□□□□□ -0.01
Msx1P13297 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Msx1P13297 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Msx1P13297 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15□□□□□ -0.01
Msx1P13297 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Gm2756-201ENSMUST00000195851 400 ntBASIC15□□□□□ -0.01
Msx1P13297 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15□□□□□ -0.01
Msx1P13297 Gm44430-201ENSMUST00000203376 995 ntBASIC15□□□□□ -0.01
Msx1P13297 CT943659.1-201ENSMUST00000215459 326 ntBASIC15□□□□□ -0.01
Msx1P13297 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15□□□□□ -0.01
Msx1P13297 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Psmb5-202ENSMUST00000227257 622 ntBASIC15□□□□□ -0.01
Msx1P13297 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msx1P13297 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms