Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.66■□□□□ 0.9
NeflP08551 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.66■□□□□ 0.9
NeflP08551 Gm21814-202ENSMUST00000203277 873 ntBASIC20.66■□□□□ 0.9
NeflP08551 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.66■□□□□ 0.9
NeflP08551 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.66■□□□□ 0.9
NeflP08551 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NeflP08551 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NeflP08551 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NeflP08551 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Asic1-205ENSMUST00000228185 1818 ntBASIC20.66■□□□□ 0.9
NeflP08551 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.66■□□□□ 0.9
NeflP08551 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NeflP08551 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NeflP08551 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NeflP08551 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.65■□□□□ 0.9
NeflP08551 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.65■□□□□ 0.9
NeflP08551 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NeflP08551 Gm8520-201ENSMUST00000186517 868 ntBASIC20.65■□□□□ 0.9
NeflP08551 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.65■□□□□ 0.9
NeflP08551 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NeflP08551 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NeflP08551 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.64■□□□□ 0.9
NeflP08551 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.64■□□□□ 0.9
NeflP08551 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NeflP08551 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NeflP08551 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NeflP08551 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NeflP08551 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NeflP08551 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.64■□□□□ 0.89
NeflP08551 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.64■□□□□ 0.89
NeflP08551 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NeflP08551 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NeflP08551 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NeflP08551 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.63■□□□□ 0.89
NeflP08551 Gm7370-201ENSMUST00000219471 767 ntBASIC20.63■□□□□ 0.89
NeflP08551 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.63■□□□□ 0.89
NeflP08551 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.63■□□□□ 0.89
NeflP08551 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NeflP08551 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NeflP08551 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NeflP08551 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NeflP08551 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NeflP08551 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NeflP08551 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NeflP08551 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NeflP08551 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NeflP08551 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NeflP08551 Gm11336-201ENSMUST00000118168 334 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms