Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PrnpP04925 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PrnpP04925 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PrnpP04925 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PrnpP04925 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.39■□□□□ 0.21
PrnpP04925 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PrnpP04925 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.39■□□□□ 0.21
PrnpP04925 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PrnpP04925 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PrnpP04925 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PrnpP04925 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PrnpP04925 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PrnpP04925 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.39■□□□□ 0.21
PrnpP04925 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PrnpP04925 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PrnpP04925 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PrnpP04925 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Gm13597-201ENSMUST00000121239 375 ntBASIC16.38■□□□□ 0.21
PrnpP04925 Mir1895-201ENSMUST00000122615 79 ntBASIC16.38■□□□□ 0.21
PrnpP04925 Gm27494-201ENSMUST00000184735 189 ntBASIC16.38■□□□□ 0.21
PrnpP04925 Gm17968-201ENSMUST00000194902 784 ntBASIC16.38■□□□□ 0.21
PrnpP04925 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.38■□□□□ 0.21
PrnpP04925 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.38■□□□□ 0.21
PrnpP04925 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.38■□□□□ 0.21
PrnpP04925 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.38■□□□□ 0.21
PrnpP04925 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PrnpP04925 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PrnpP04925 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PrnpP04925 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gm8396-201ENSMUST00000057361 823 ntBASIC16.37■□□□□ 0.21
PrnpP04925 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.37■□□□□ 0.21
PrnpP04925 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.37■□□□□ 0.21
PrnpP04925 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PrnpP04925 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PrnpP04925 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.37■□□□□ 0.21
PrnpP04925 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PrnpP04925 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PrnpP04925 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.36■□□□□ 0.21
PrnpP04925 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PrnpP04925 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.36■□□□□ 0.21
PrnpP04925 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.36■□□□□ 0.21
PrnpP04925 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.36■□□□□ 0.21
PrnpP04925 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.36■□□□□ 0.21
PrnpP04925 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.36■□□□□ 0.21
PrnpP04925 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.36■□□□□ 0.21
PrnpP04925 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PrnpP04925 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PrnpP04925 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.36■□□□□ 0.21
PrnpP04925 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PrnpP04925 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PrnpP04925 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PrnpP04925 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.35■□□□□ 0.21
PrnpP04925 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms