Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.31■□□□□ 0.68
Cops6O88545 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.31■□□□□ 0.68
Cops6O88545 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.31■□□□□ 0.68
Cops6O88545 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.31■□□□□ 0.68
Cops6O88545 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cops6O88545 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.31■□□□□ 0.68
Cops6O88545 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cops6O88545 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.3■□□□□ 0.68
Cops6O88545 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.3■□□□□ 0.68
Cops6O88545 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.3■□□□□ 0.68
Cops6O88545 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.3■□□□□ 0.68
Cops6O88545 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.3■□□□□ 0.68
Cops6O88545 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cops6O88545 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cops6O88545 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops6O88545 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cops6O88545 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cops6O88545 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.29■□□□□ 0.68
Cops6O88545 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.29■□□□□ 0.68
Cops6O88545 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cops6O88545 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.29■□□□□ 0.68
Cops6O88545 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.29■□□□□ 0.68
Cops6O88545 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.29■□□□□ 0.68
Cops6O88545 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.29■□□□□ 0.68
Cops6O88545 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.29■□□□□ 0.68
Cops6O88545 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cops6O88545 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops6O88545 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.28■□□□□ 0.68
Cops6O88545 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cops6O88545 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.28■□□□□ 0.68
Cops6O88545 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cops6O88545 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cops6O88545 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.28■□□□□ 0.68
Cops6O88545 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops6O88545 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cops6O88545 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.27■□□□□ 0.68
Cops6O88545 Gm13597-201ENSMUST00000121239 375 ntBASIC19.27■□□□□ 0.68
Cops6O88545 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.27■□□□□ 0.68
Cops6O88545 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Cops6O88545 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.27■□□□□ 0.68
Cops6O88545 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops6O88545 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cops6O88545 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms