Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.24□□□□□ -0.13
Cops3O88543 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Cops3O88543 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cops3O88543 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cops3O88543 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cops3O88543 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Gm26039-201ENSMUST00000158152 144 ntBASIC14.23□□□□□ -0.13
Cops3O88543 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cops3O88543 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cops3O88543 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops3O88543 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cops3O88543 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Cops3O88543 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Gm13559-201ENSMUST00000120476 863 ntBASIC14.22□□□□□ -0.13
Cops3O88543 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.22□□□□□ -0.13
Cops3O88543 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.22□□□□□ -0.13
Cops3O88543 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Cops3O88543 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.22□□□□□ -0.13
Cops3O88543 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.22□□□□□ -0.13
Cops3O88543 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cops3O88543 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops3O88543 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.21□□□□□ -0.13
Cops3O88543 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cops3O88543 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.21□□□□□ -0.13
Cops3O88543 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Asic1-205ENSMUST00000228185 1818 ntBASIC14.21□□□□□ -0.13
Cops3O88543 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.21□□□□□ -0.13
Cops3O88543 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cops3O88543 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Mir1668-201ENSMUST00000184114 107 ntBASIC14.21□□□□□ -0.13
Cops3O88543 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Cops3O88543 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cops3O88543 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms