Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdlim1O70400 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.64■□□□□ 0.09
Pdlim1O70400 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pdlim1O70400 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.64■□□□□ 0.09
Pdlim1O70400 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pdlim1O70400 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim1O70400 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.63■□□□□ 0.09
Pdlim1O70400 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.62■□□□□ 0.09
Pdlim1O70400 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.62■□□□□ 0.09
Pdlim1O70400 Gm18622-201ENSMUST00000219361 595 ntBASIC15.62■□□□□ 0.09
Pdlim1O70400 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.62■□□□□ 0.09
Pdlim1O70400 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim1O70400 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim1O70400 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms