Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cntnap1O54991 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.3■□□□□ 0.84
Cntnap1O54991 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.29■□□□□ 0.84
Cntnap1O54991 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cntnap1O54991 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cntnap1O54991 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cntnap1O54991 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cntnap1O54991 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cntnap1O54991 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Cntnap1O54991 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gm9257-201ENSMUST00000221254 232 ntBASIC20.28■□□□□ 0.84
Cntnap1O54991 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntnap1O54991 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cntnap1O54991 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cntnap1O54991 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cntnap1O54991 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cntnap1O54991 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cntnap1O54991 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.27■□□□□ 0.84
Cntnap1O54991 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cntnap1O54991 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Cntnap1O54991 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC20.27■□□□□ 0.84
Cntnap1O54991 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cntnap1O54991 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cntnap1O54991 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cntnap1O54991 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cntnap1O54991 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cntnap1O54991 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cntnap1O54991 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
Cntnap1O54991 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cntnap1O54991 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.26■□□□□ 0.83
Cntnap1O54991 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.26■□□□□ 0.83
Cntnap1O54991 Gm15483-201ENSMUST00000120338 456 ntBASIC20.26■□□□□ 0.83
Cntnap1O54991 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Mir3102-201ENSMUST00000175555 104 ntBASIC20.26■□□□□ 0.83
Cntnap1O54991 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Cntnap1O54991 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.26■□□□□ 0.83
Cntnap1O54991 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntnap1O54991 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cntnap1O54991 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.25■□□□□ 0.83
Cntnap1O54991 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.25■□□□□ 0.83
Cntnap1O54991 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC20.25■□□□□ 0.83
Cntnap1O54991 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Gm18827-201ENSMUST00000188341 790 ntBASIC20.25■□□□□ 0.83
Cntnap1O54991 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.25■□□□□ 0.83
Cntnap1O54991 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cntnap1O54991 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntnap1O54991 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cntnap1O54991 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.24■□□□□ 0.83
Cntnap1O54991 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Gm11918-201ENSMUST00000121660 179 ntBASIC20.24■□□□□ 0.83
Cntnap1O54991 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.24■□□□□ 0.83
Cntnap1O54991 Gm37917-201ENSMUST00000194711 392 ntBASIC20.24■□□□□ 0.83
Cntnap1O54991 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms