Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr1i3O35627 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1i3O35627 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr1i3O35627 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1i3O35627 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr1i3O35627 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1i3O35627 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr1i3O35627 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gm11950-201ENSMUST00000121615 838 ntBASIC17.04■□□□□ 0.32
Nr1i3O35627 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gm6345-202ENSMUST00000180900 204 ntBASIC17.04■□□□□ 0.32
Nr1i3O35627 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr1i3O35627 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nr1i3O35627 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.04■□□□□ 0.32
Nr1i3O35627 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1i3O35627 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.03■□□□□ 0.32
Nr1i3O35627 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.03■□□□□ 0.32
Nr1i3O35627 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nr1i3O35627 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1i3O35627 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Nr1i3O35627 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Nr1i3O35627 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.02■□□□□ 0.32
Nr1i3O35627 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Gm13312-201ENSMUST00000119631 718 ntBASIC17.02■□□□□ 0.32
Nr1i3O35627 Gm25016-201ENSMUST00000158399 131 ntBASIC17.02■□□□□ 0.32
Nr1i3O35627 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.02■□□□□ 0.32
Nr1i3O35627 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1i3O35627 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1i3O35627 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.02■□□□□ 0.31
Nr1i3O35627 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1i3O35627 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1i3O35627 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1i3O35627 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.02■□□□□ 0.31
Nr1i3O35627 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1i3O35627 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nr1i3O35627 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms