Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.65■□□□□ 0.1
Slc1a6O35544 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc1a6O35544 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc1a6O35544 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc1a6O35544 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc1a6O35544 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc1a6O35544 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Slc1a6O35544 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Slc1a6O35544 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.63■□□□□ 0.09
Slc1a6O35544 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Slc1a6O35544 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.63■□□□□ 0.09
Slc1a6O35544 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc1a6O35544 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Gm8520-201ENSMUST00000186517 868 ntBASIC15.62■□□□□ 0.09
Slc1a6O35544 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.62■□□□□ 0.09
Slc1a6O35544 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc1a6O35544 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc1a6O35544 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc1a6O35544 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Slc1a6O35544 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc1a6O35544 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms