Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.42□□□□□ -0.42
Tnfsf11O35235 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Trmt13-210ENSMUST00000198454 880 ntBASIC12.41□□□□□ -0.42
Tnfsf11O35235 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tnfsf11O35235 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.41□□□□□ -0.42
Tnfsf11O35235 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf11O35235 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.4□□□□□ -0.42
Tnfsf11O35235 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.4□□□□□ -0.42
Tnfsf11O35235 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Gm37856-201ENSMUST00000191634 999 ntBASIC12.4□□□□□ -0.42
Tnfsf11O35235 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfsf11O35235 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfsf11O35235 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.4□□□□□ -0.43
Tnfsf11O35235 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfsf11O35235 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfsf11O35235 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Gm12085-201ENSMUST00000119263 940 ntBASIC12.39□□□□□ -0.43
Tnfsf11O35235 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms