Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Gm6345-202ENSMUST00000180900 204 ntBASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf11bO08712 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11bO08712 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11bO08712 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11bO08712 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms