Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gm13829-201ENSMUST00000119600 138 ntBASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gm16215-201ENSMUST00000161990 637 ntBASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Mir706-201ENSMUST00000102262 84 ntBASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx1-1G3UXB3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Gm8602-201ENSMUST00000184045 607 ntBASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx1-1G3UXB3 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Gm12372-201ENSMUST00000121654 768 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx1-1G3UXB3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms