Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm4518-201ENSMUST00000182638 718 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.01■□□□□ 0.63
NpcdF8VQB8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NpcdF8VQB8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19■□□□□ 0.63
NpcdF8VQB8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19■□□□□ 0.63
NpcdF8VQB8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19■□□□□ 0.63
NpcdF8VQB8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19■□□□□ 0.63
NpcdF8VQB8 Gm12428-201ENSMUST00000119844 727 ntBASIC19■□□□□ 0.63
NpcdF8VQB8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19■□□□□ 0.63
NpcdF8VQB8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19■□□□□ 0.63
NpcdF8VQB8 Gm43474-201ENSMUST00000196415 774 ntBASIC19■□□□□ 0.63
NpcdF8VQB8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19■□□□□ 0.63
NpcdF8VQB8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19■□□□□ 0.63
NpcdF8VQB8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19■□□□□ 0.63
NpcdF8VQB8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NpcdF8VQB8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NpcdF8VQB8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
NpcdF8VQB8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.99■□□□□ 0.63
NpcdF8VQB8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Gm22175-201ENSMUST00000175007 78 ntBASIC18.99■□□□□ 0.63
NpcdF8VQB8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NpcdF8VQB8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm13597-201ENSMUST00000121239 375 ntBASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm27437-201ENSMUST00000183429 107 ntBASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm43767-201ENSMUST00000198933 381 ntBASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm45747-201ENSMUST00000212203 999 ntBASIC18.98■□□□□ 0.63
NpcdF8VQB8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NpcdF8VQB8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 312.3 ms