Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc85cE9Q6B2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Syt7-204ENSMUST00000223586 1344 ntBASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc85cE9Q6B2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Gm14719-201ENSMUST00000121891 340 ntBASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Mir1938-201ENSMUST00000158746 100 ntBASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc85cE9Q6B2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc85cE9Q6B2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Gm6745-201ENSMUST00000199216 526 ntBASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc85cE9Q6B2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc85cE9Q6B2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85cE9Q6B2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms