Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm7783-201ENSMUST00000204795 781 ntBASIC8.81□□□□□ -1
Herc1E9PZP8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC8.81□□□□□ -1
Herc1E9PZP8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC8.8□□□□□ -1
Herc1E9PZP8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC8.8□□□□□ -1
Herc1E9PZP8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.8□□□□□ -1
Herc1E9PZP8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Gm10154-201ENSMUST00000084445 354 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC8.8□□□□□ -1
Herc1E9PZP8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC8.8□□□□□ -1
Herc1E9PZP8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.8□□□□□ -1
Herc1E9PZP8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC8.8□□□□□ -1
Herc1E9PZP8 Gm9176-201ENSMUST00000219955 1120 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Gm7669-201ENSMUST00000210184 1603 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 B9d1os-201ENSMUST00000137010 674 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC8.8□□□□□ -1
Herc1E9PZP8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Herc1E9PZP8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC8.8□□□□□ -1
Herc1E9PZP8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Gm8565-201ENSMUST00000183259 1014 ntBASIC8.8□□□□□ -1
Herc1E9PZP8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Herc1E9PZP8 Gm5320-201ENSMUST00000207163 1519 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm5566-201ENSMUST00000116118 459 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm5898-201ENSMUST00000121016 2071 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC8.79□□□□□ -1
Herc1E9PZP8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC8.79□□□□□ -1
Herc1E9PZP8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm27341-201ENSMUST00000183570 106 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Gm27501-201ENSMUST00000183599 107 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Mir6392-201ENSMUST00000184924 108 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Gm43947-201ENSMUST00000203019 959 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm34220-201ENSMUST00000223001 2709 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Herc1E9PZP8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm18737-201ENSMUST00000173594 937 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Herc1E9PZP8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 Gm27701-201ENSMUST00000184498 110 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC8.79□□□□□ -1
Herc1E9PZP8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.79□□□□□ -1
Herc1E9PZP8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC8.78□□□□□ -1
Herc1E9PZP8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Herc1E9PZP8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Herc1E9PZP8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Herc1E9PZP8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC8.78□□□□□ -1
Herc1E9PZP8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC8.78□□□□□ -1
Herc1E9PZP8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC8.78□□□□□ -1
Herc1E9PZP8 Gm15483-201ENSMUST00000120338 456 ntBASIC8.78□□□□□ -1
Herc1E9PZP8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.78□□□□□ -1
Herc1E9PZP8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.78□□□□□ -1
Herc1E9PZP8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC8.78□□□□□ -1
Herc1E9PZP8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Herc1E9PZP8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms