Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Gm27301-201ENSMUST00000184012 127 ntBASIC13.32□□□□□ -0.28
Col6a4A2AX52 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.32□□□□□ -0.28
Col6a4A2AX52 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.32□□□□□ -0.28
Col6a4A2AX52 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm4518-201ENSMUST00000182638 718 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm5745-201ENSMUST00000183748 313 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.31□□□□□ -0.28
Col6a4A2AX52 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a4A2AX52 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms