Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.56■□□□□ 0.24
Scn1aA2APX8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 App-207ENSMUST00000227737 2827 ntBASIC16.56■□□□□ 0.24
Scn1aA2APX8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Gm9682-201ENSMUST00000197505 556 ntBASIC16.55■□□□□ 0.24
Scn1aA2APX8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.55■□□□□ 0.24
Scn1aA2APX8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn1aA2APX8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Gm43514-201ENSMUST00000198852 424 ntBASIC16.54■□□□□ 0.24
Scn1aA2APX8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn1aA2APX8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.53■□□□□ 0.24
Scn1aA2APX8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.53■□□□□ 0.24
Scn1aA2APX8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn1aA2APX8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Gm37153-201ENSMUST00000193637 231 ntBASIC16.52■□□□□ 0.24
Scn1aA2APX8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn1aA2APX8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms