Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5580A0A0N4SVP8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5580A0A0N4SVP8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5580A0A0N4SVP8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.29■□□□□ 0.36
Gm5580A0A0N4SVP8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms