Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm12497-201ENSMUST00000138778 237 ntBASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm18622-201ENSMUST00000219361 595 ntBASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.24■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atg4a-psA0A0G2JFS9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms